PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679365.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 166aa    MW: 18041.3 Da    PI: 6.8903
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-173585155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+WvAeIr p     +  +r +lg+f +  +Aa+a+++a+++l+g
  XP_020679365.1 35 CSYRGVRQRT-WGKWVAEIRMP-----NhgARLWLGTFNSSLDAARAYDHAARSLYG 85
                    67*****999.**********9.....336***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MPTVTNKEKK KKCCPLRRSR KGCMKGKGGP ENPFCSYRGV RQRTWGKWVA EIRMPNHGAR  60
LWLGTFNSSL DAARAYDHAA RSLYGDCACL NLPHVGLATA SIGEESGKEE ETALFDGGAG  120
LDDLEEYVMR LPKAEDFGLD AFHDVAGRCG GFGDDGVGGG REVDEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.11e-38ERF family protein