PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679385.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family FAR1
Protein Properties Length: 398aa    MW: 46565.2 Da    PI: 8.2718
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.52.5e-142603190
            FAR1 31 rtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    ++fvC k g+++  + + +k++ ++++trtgC a++k + ++dg+w+v+k+ ++HnHela
  XP_020679385.1  2 KDFVCLKAGFKKGLDLN-VKSKYRKSNTRTGCPAMIKFSVDQDGEWKVNKCIENHNHELA 60
                    78***********9999.9999999*********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MKDFVCLKAG FKKGLDLNVK SKYRKSNTRT GCPAMIKFSV DQDGEWKVNK CIENHNHELA  60
RPEDQHLLRS CMNIIEERAF ILKSLTNAGI RTIDAFTYLA NEVGGREYVG FLRIDAYNFV  120
QKNRRCKIES GDTNSLIEIF KNRPNSDNMF VWEVQYDKED RLINFFWADG VGRIDYDSFG  180
DVILFDTSYR LNKYNLACAP FVAVNNQWQN VLLGVAFLSE ETIESFTWLF KTFLRVSGDK  240
HPITIFTNQD QAMSRAIEIA FPQTRHRLCQ WHITKKLPSK LHCYNSNNKV RGLIYKCFSK  300
CDLEEKFESY WTEMLNEGDL HSHDWLKELY KIRHKWSTAY NKTCFNLGIL STQCSESTSN  360
VCHGIFKPTS IITECFLGLE KVMKTWRRNE KDEDFKCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-70FAR1 family protein