PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679503.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 175aa    MW: 19168.1 Da    PI: 10.3442
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.92.2e-082967947
                     HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     d l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_020679503.1 29 DRLFLLGLEKFGKGDWRSISRNFVVSRTPTQVASHAQKY 67
                     6789999*******************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
FIFHFFIILI FPNRNLPYDC QSNITSLIDR LFLLGLEKFG KGDWRSISRN FVVSRTPTQV  60
ASHAQKYFIR LNSINRDRRR SSIHDITNVN GGDAPTSQGP ITGQGIVNSA PAVGSFINQP  120
PQPNIPAMGI YGTPMGHPVP GHMVSAAVGT PVMIPPGHAP YVMPVAYPIP PTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.18e-23MYB family protein