PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679682.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 216aa    MW: 23720 Da    PI: 8.6067
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679682.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.43.4e-282473458
     ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     +Y+eCl+NhAa++Gg+a+DGCgEfm+      + ++lkCaACgCHRnFHRre +
  XP_020679682.2 24 SKYRECLRNHAAAMGGQAYDGCGEFMAG-----EEESLKCAACGCHRNFHRREGS 73
                    68*************************7.....4589***************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDLSLVPYVE STAAEKTAAA AGDSKYRECL RNHAAAMGGQ AYDGCGEFMA GEEESLKCAA  60
CGCHRNFHRR EGSPTHRPLL KHAMLPAPSP VAFFPPPPLP FHQIPTPVSP DPGRGASETP  120
PRREEGPMRK RYRTKFTAEQ KEKMWIFAEK LGWRIQKHDD EKLEEFCVEI GVKRHALKVW  180
MHNHKNNLST SAITTAAGHG PSSAAAADAA APTIRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-47ZF-HD family protein