PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020679816.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 203aa    MW: 23129.9 Da    PI: 9.1166
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020679816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.8e-055072123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_020679816.1 50 YTCSFCKREFRSAQALGGHMNVH 72
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MEKHREKYSS ISENNYKVSR DQQVMRYGRT FLGRGDPSTA VGFSWPPRSY TCSFCKREFR  60
SAQALGGHMN VHRRDRARLR QCSPPWEHPS PSNPNPNIKP NPNPNNVPNL NMPPPSLSAR  120
DDKPSSVLYT FPSLISPHTF PLSSNSSLFG VREWRNFIEE GGRKDGRVMR EETEVMKLSL  180
DVEVDYGDLD GGSLDLELRL GYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-24C2H2 family protein