PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680286.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 198aa    MW: 22498.4 Da    PI: 6.1524
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.61.2e-36101231128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF P+deelv ++L++k++  +++  ++i+++d+++++PwdL+ k+ ++ k wyfFs+r +        nrat +gyWk+ g d+ v++ 
  XP_020680286.1  10 LPPGFRFFPSDEELVRHFLRRKASMLPCHP-DIIPTLDLLHFDPWDLHCKALKGGKYWYFFSHRTE--------NRATPNGYWKQVGVDEFVKD- 94 
                     79*************************999.99**************966667899******9855........89************999988. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         vg+kktLvfy g+a+ g kt+W+mhey l
  XP_020680286.1  95 ----VGMKKTLVFYVGDASGGMKTNWIMHEYCL 123
                     ....***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGEDAGAGNL PPGFRFFPSD EELVRHFLRR KASMLPCHPD IIPTLDLLHF DPWDLHCKAL  60
KGGKYWYFFS HRTENRATPN GYWKQVGVDE FVKDVGMKKT LVFYVGDASG GMKTNWIMHE  120
YCLLDSEASS SSRSNGRKLS RKKGQAKAGD ANYRWVVCRV CESGHSVQPC SQDEAMELSC  180
LDEIFLSFDD YDEVSLPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.15e-62NAC family protein