PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680305.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family S1Fa-like
Protein Properties Length: 78aa    MW: 8383.06 Da    PI: 10.7953
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA127.34.6e-401278470
            S1FA  4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                    +  e+kGlnP livllvv +lll+f++gny+lyvyaqk+lPP+kkkP+skkklk+e+l+qGv++PGe
  XP_020680305.1 12 TVGESKGLNPALIVLLVVVALLLLFFIGNYALYVYAQKTLPPKKKKPISKKKLKKERLRQGVSAPGE 78
                    5569**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MAAFADGGGN NTVGESKGLN PALIVLLVVV ALLLLFFIGN YALYVYAQKT LPPKKKKPIS  60
KKKLKKERLR QGVSAPGE