PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680526.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 201aa    MW: 21854.6 Da    PI: 6.1216
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.3e-185199355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_020680526.1 51 YHGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 99
                    99***998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAEQLSSSEQ RSSISSPSSS SPSSSPPSPP AISATADGSK RTREQSKHPA YHGVRMRNWG  60
KWVSEIREPR KKSRIWLGTF PTPEMAARAH DVAALSIKGS AAILNFPELA ASLPRPATLC  120
PRDVQAAAAK AAAMEPPMEA SPPSPYELGE IVELPRLVDL VFHDTAVDSC PLFWAEKSED  180
SALFSDSVWP PNNFEALLWN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-52ERF family protein