PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680601.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 213aa    MW: 23152.2 Da    PI: 8.4717
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-08117157954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_020680601.1 117 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 157
                     699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MEANFPHSST MPANPQIDWT AMVMQMEKLT EFSDSSSAYS APPTPASPVF SSFQSPPSVA  60
EEYLPAPPHG PAVSVDSMRE MIFRIAAMQP VHIDPESVKP PKRRNVRISK DPQSVAARHR  120
RERISEKIRI LQRLVPGGTK MDTASMLDEA IHYVKFLKTQ VQCLERGSSG GGSGRSVGYA  180
RAGAAAPTLA NQSSAFGFFE ADYLATGHGF AEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-46bHLH family protein