PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680650.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 129aa    MW: 14161.8 Da    PI: 7.7557
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1001.7e-3153107358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                      +rY eC+kNhAas+Gg+avDGC+Efm+s g++gta+al CaAC+CHR+FH+reve
  XP_020680650.1  53 VIRYTECRKNHAASMGGYAVDGCREFMAS-GDDGTASALLCAACNCHRSFHKREVE 107
                     589*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MPTFSSSSIH LLSNFGRRRA EESMRPQPEP NNANYISPPN GSTRKKIKDQ KVVIRYTECR  60
KNHAASMGGY AVDGCREFMA SGDDGTASAL LCAACNCHRS FHKREVELDQ PPLCDCSSTS  120
TSTSEVENS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.11e-28ZF-HD family protein