PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680799.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 140aa    MW: 16129.9 Da    PI: 10.597
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.00162446123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C++ F++   L  H  +H
  XP_020680799.1 24 FECKTCSRKFPTFQALGGHRTSH 46
                    89**********99998888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MANLLLLRSS GGVKKPALWR RRLFECKTCS RKFPTFQALG GHRTSHNRLI RAGKKLELAT  60
FPERKKVHCC PVCGMEFLMG QALGGHMRRH RRDSDAATAA AVDRRVDVED EEKKAVLFDL  120
NLPLRPVEFL WEEIPLFHFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46070.13e-21C2H2 family protein