PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020680888.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family B3
Protein Properties Length: 149aa    MW: 17089.8 Da    PI: 8.9587
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020680888.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.71.8e-171771799
                    E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    vl kkf+++++g+     t+ l+ +sg +W v++  +k+++++vl  GW +Fv a  + e+D++vFk+dgrs+f   v +f++
  XP_020680888.2  1 VLLKKFIDHFQGE--LLETIELKVPSGDKWHVEM--KKTGDGVVLDCGWTNFVAAYSILENDTLVFKYDGRSSF--IVLMFEQ 77
                    5789999777776..6679***************..***********************************999..8887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
VLLKKFIDHF QGELLETIEL KVPSGDKWHV EMKKTGDGVV LDCGWTNFVA AYSILENDTL  60
VFKYDGRSSF IVLMFEQSGC EKAASHCAMR KDGMEELCAI ASGKKDRHPC YESSPKTYEQ  120
PKKLAMFKKI LRANRDAKEK YLKRRMNTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-13B3 family protein