PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681069.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 193aa    MW: 20380.7 Da    PI: 4.2143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681069.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-162574256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    gy+G+r  +++g+Wv+eIr+p+    +  r++lg++ t+e+Aa a++ a+++l+g+
  XP_020681069.2 25 GYRGIR--SRSGKWVSEIREPR----KaNRIWLGTYPTPEMAAVAYDVAALALRGA 74
                    8****6..678*********95....358************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MADPNQKPDD VDPPAPSPGS DRPAGYRGIR SRSGKWVSEI REPRKANRIW LGTYPTPEMA  60
AVAYDVAALA LRGADAVLNF PEAAKSRPAP ASSSAADIRV AAAAAAAELK ARLDAGGAGG  120
SGAGGSEPLL EMKREAEGGE FVDEEELFEM PLLLANMAEG MLVSPPRMSS PETEESVLEV  180
SEGEKLWKFD DDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-19ERF family protein