PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681146.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 205aa    MW: 23026.8 Da    PI: 6.5191
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.1e-2845102359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D ++WrKYGqK++k+s++pr+YYrC+s+ gC++kk+ver+++d+++++itY+++ nh+
  XP_020681146.1  45 DYWSWRKYGQKPIKDSPYPRAYYRCSSSkGCSAKKQVERCKKDESLIIITYTSSDNHP 102
                     99************************998***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDGFPSKQLM MDASDPNRKK MAQKTVVIVR AEAKLGKHGG EAPPDYWSWR KYGQKPIKDS  60
PYPRAYYRCS SSKGCSAKKQ VERCKKDESL IIITYTSSDN HPGPVPSSLN KSINSSRIPF  120
LNEDCRSSEK NRNVEDNYES SIVKCAQEST EKVQGEGDTI SSSIEPVNCS MEDNDIFDEL  180
DELPLPSSFN SLVRSSIFYE KIIPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.14e-32WRKY family protein