PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681166.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 258aa    MW: 28944.7 Da    PI: 9.3176
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681166.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer91.57.9e-2950100358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     + +Y+eClkNhAas+Ggh++DGCgEfmp+     + ++lkCaAC CHR+FHR+ ++
  XP_020681166.1  50 TSKYRECLKNHAASIGGHVLDGCGEFMPN-----EEDSLKCAACACHRSFHRKASD 100
                     679*************************8.....4589***************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MEFRSNHDDG PHATPISLAH SPTSIRTSAF SKPPSFNNGL ALSPTTPATT SKYRECLKNH  60
AASIGGHVLD GCGEFMPNEE DSLKCAACAC HRSFHRKASD AGASKRSPAS APLPLLLPPP  120
PLHKYRHHQK HFGFQPSLSG GTTTDSSSDE QMDVNDVVAT AAQPTHMVVT ASRKRFRTTF  180
TVEQKEKMLG FAERVGWRLQ KQYENAIDEF CNEIGVRRKV FKVWMHNNKH SIRKQQLLMQ  240
KQPHEQLEHL SLQQREEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.16e-48ZF-HD family protein