PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681315.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 174aa    MW: 19198.5 Da    PI: 10.348
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-163483255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +k +g+WvAeIr+p   +kr r++l ++ t+  Aa+a++ a   l+g
  XP_020681315.1 34 PYRGVRMRK-WGKWVAEIREP---NKRSRIWLRSYSTPVAAARAYDTAVYLLRG 83
                    59*****99.**********9...336*********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEERKKERRR PPPSLQPCSP PASAAAEGSG RERPYRGVRM RKWGKWVAEI REPNKRSRIW  60
LRSYSTPVAA ARAYDTAVYL LRGRSARLNF PDELNAEEAT SGIMEEVAAA TASLSAASIR  120
KKATEVGARV DAQLQQNHPP LPQPLTSSSS AKSSRSCKNP DLNQQPSPDT SDDE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1311ERKKERRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.15e-38ERF family protein