PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681359.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 215aa    MW: 23420.8 Da    PI: 6.9763
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16e-2071120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp   + + +r++lg+f tae+Aa a+++a++k++g
  XP_020681359.1  71 HFRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEDAAMAYDNAALKFKG 120
                     69*******.**********9...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MRGKEEEYEF NFPHYTPSRA EYDTSAMVSA LAHVIGGGGA GAGELAAGEA INSATDLPSE  60
AQGHEKEKKR HFRGVRQRPW GKWAAEIRDP NKAARVWLGT FETAEDAAMA YDNAALKFKG  120
KKAKLNFPEK VPNGNLFLNN RGVISQQNDQ SSITASDLVL YDSQASTISF ASSSQDYFTS  180
EVMLNFGDYS SGSSSGSSTS WPKKSYGDKR GKDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.14e-20ERF family protein