PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020681520.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 213aa    MW: 24477 Da    PI: 5.2804
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020681520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.2e-1062109454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ +rE+ RRd++N++f eL +ll      +  K +K +iL  +++ +++L
  XP_020681520.1  62 SKAIREKMRRDKMNERFLELSKLLEAG---RPAKSDKFAILDDTIRILSEL 109
                     5789**********************8...88**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MMESDELDID YYSRIMEEAA FIDIYLNEPQ SAVGTDASSP ETIAQNGSRK RERDESCVGQ  60
GSKAIREKMR RDKMNERFLE LSKLLEAGRP AKSDKFAILD DTIRILSELR AEALELTKKN  120
KKLEEEIATL KEEKNELKEE KSLLKAEKER IEGYFRTMPM FAAGYMPPHP VAYHPVANKM  180
MTFPNYGAIP MWQFLPPSAR DVSKDHELRP PMA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.22e-40bHLH family protein