PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020681899.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 522aa MW: 56707.2 Da PI: 6.6533

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020681899.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.9	3.3e-11	394	452	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ +a l+s++ XP_020681899.1 394 KRAKRILANRQSAARSKERKMRYITELEHKVQTLQTEATTLSAQLTVLQRDSAGLTSQN 452 9**************************************************99999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MEEAESSCQS AMQTLKPSTT STSSSPPLNL PNRLDIPCFQ SPAGGRVFYR QCPPTLNSDV 60 AKRPGIPPVH PLLPPTSPYS QMPPNFNPSP SHSNSICQPS FLSPEFLPSL TSFPFPDPAS 120 SAVPGLSLSD PATSGDVNMG DSSAPQTPVQ LHRTIADGIP QRKAHRRSLS DIPFAFFQSS 180 SPISGLPPLP QHLPVARESF TLGSVKHRSQ FVKQESECDR EGDNDPKSEG HAGDDLISAY 240 MNLDSLDTLN SSGTDDRNDM DSRASGSKTT GAESSENEAE SESSMNEGLS RMGKRKDRNK 300 RSAVGDPAMN HMAPRHSRSV SMDSFMGNLN FGDQLPKPPP SPGSRSAQHS RNGSVDGITG 360 TFSLEFGNGE FTGAELKKIM ANEKLSEIAM SDPKRAKRIL ANRQSAARSK ERKMRYITEL 420 EHKVQTLQTE ATTLSAQLTV LQRDSAGLTS QNSHLKFRLQ AMEQQAQLRD ALNEALSAEV 480 QRLKLANGEP ISASLSQQIQ LNPQMFQLQQ QNADVADQEM KL

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MEEAESSCQS AMQTLKPSTT STSSSPPLNL PNRLDIPCFQ SPAGGRVFYR QCPPTLNSDV  60
AKRPGIPPVH PLLPPTSPYS QMPPNFNPSP SHSNSICQPS FLSPEFLPSL TSFPFPDPAS  120
SAVPGLSLSD PATSGDVNMG DSSAPQTPVQ LHRTIADGIP QRKAHRRSLS DIPFAFFQSS  180
SPISGLPPLP QHLPVARESF TLGSVKHRSQ FVKQESECDR EGDNDPKSEG HAGDDLISAY  240
MNLDSLDTLN SSGTDDRNDM DSRASGSKTT GAESSENEAE SESSMNEGLS RMGKRKDRNK  300
RSAVGDPAMN HMAPRHSRSV SMDSFMGNLN FGDQLPKPPP SPGSRSAQHS RNGSVDGITG  360
TFSLEFGNGE FTGAELKKIM ANEKLSEIAM SDPKRAKRIL ANRQSAARSK ERKMRYITEL  420
EHKVQTLQTE ATTLSAQLTV LQRDSAGLTS QNSHLKFRLQ AMEQQAQLRD ALNEALSAEV  480
QRLKLANGEP ISASLSQQIQ LNPQMFQLQQ QNADVADQEM KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-113	bZIP family protein