PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020681953.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

BES1

Protein Properties

Length: 683aa MW: 76772 Da PI: 6.2794

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020681953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	147.5	1.1e-45	59	217	2	139
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.............eeaeaag 83 g+grk+++kE+E++k+RER+RRai++++++GLR++Gn++lp+raD+n+Vl+AL+reAGw+v++DGttyr + p+ + ++ XP_020681953.1 59 GTGRKEREKEKERTKLRERHRRAITSRMLSGLRQHGNFPLPARADMNDVLAALAREAGWTVDPDGTTYRPSPTPPpplppppavaappNPLSQLA 153 689****************************************************************66655544432222211113444455 PP DUF822 84 ssasaspesslq.sslkssalaspvesysaspksssfpspssldsislasa.......asllpv 139 + +s+essl+ +slk+ + ++p +s+++ ++ ++ +spsslds+ +++ ++++p+ XP_020681953.1 154 PFLVRSIESSLSvTSLKNRTSQAPSDSQASFLRIDDGLSPSSLDSVVVTERdikndkfTNSSPI 217 5566999999999*******************************999875555444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MSLKQDLERH QQHSDHSSDH HSHPPPQRRP RGFAAAAAAA VGAVGSATTP PAGTSVLPGT 60 GRKEREKEKE RTKLRERHRR AITSRMLSGL RQHGNFPLPA RADMNDVLAA LAREAGWTVD 120 PDGTTYRPSP TPPPPLPPPP AVAAPPNPLS QLAPFLVRSI ESSLSVTSLK NRTSQAPSDS 180 QASFLRIDDG LSPSSLDSVV VTERDIKNDK FTNSSPINSS ECVDADQLMQ GALEQDGDFV 240 GTPYVPVYIT LAASIINSYC QLVDPEAVRH ELEQLKGLHI DGVVVDCWWG IVEGWSPHKY 300 QWSGYRDLFN IIREFKLKLQ VVLAFHENGG KESGDMVISL PKWILEIGQD NQDIFFTDHE 360 GRRNTECLSW GIDKERVLKG RTGIEVYFDF MRSFRMEFDD LFEEGMISAI EIGLGASGEL 420 KYPSHSEKIG WRYPGIGEFQ CYDKYMQQNL RRAARVRGHS FWARGPNNAG HYNSRPHETG 480 FFCDRGDYDS YYGRFFLHWY SQVLINHADQ VLSLASLAFE GTQLAVKIPA IYWWYRTSSH 540 AAELTAGYYN PTNQDGYSPV FDLLKKHFVT IKFVLVSQTP GSLNETDEAW SDPEGQSWQV 600 LNSAWDRRLI VAGQGNFQCH DRDACIRVLE TAKPRNDPDR HHLSFFTYQT VSPVFMQGDL 660 FLSDLDSFIK SMHGDILSVD DAV

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MSLKQDLERH QQHSDHSSDH HSHPPPQRRP RGFAAAAAAA VGAVGSATTP PAGTSVLPGT  60
GRKEREKEKE RTKLRERHRR AITSRMLSGL RQHGNFPLPA RADMNDVLAA LAREAGWTVD  120
PDGTTYRPSP TPPPPLPPPP AVAAPPNPLS QLAPFLVRSI ESSLSVTSLK NRTSQAPSDS  180
QASFLRIDDG LSPSSLDSVV VTERDIKNDK FTNSSPINSS ECVDADQLMQ GALEQDGDFV  240
GTPYVPVYIT LAASIINSYC QLVDPEAVRH ELEQLKGLHI DGVVVDCWWG IVEGWSPHKY  300
QWSGYRDLFN IIREFKLKLQ VVLAFHENGG KESGDMVISL PKWILEIGQD NQDIFFTDHE  360
GRRNTECLSW GIDKERVLKG RTGIEVYFDF MRSFRMEFDD LFEEGMISAI EIGLGASGEL  420
KYPSHSEKIG WRYPGIGEFQ CYDKYMQQNL RRAARVRGHS FWARGPNNAG HYNSRPHETG  480
FFCDRGDYDS YYGRFFLHWY SQVLINHADQ VLSLASLAFE GTQLAVKIPA IYWWYRTSSH  540
AAELTAGYYN PTNQDGYSPV FDLLKKHFVT IKFVLVSQTP GSLNETDEAW SDPEGQSWQV  600
LNSAWDRRLI VAGQGNFQCH DRDACIRVLE TAKPRNDPDR HHLSFFTYQT VSPVFMQGDL  660
FLSDLDSFIK SMHGDILSVD DAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein