PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020681999.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 683aa MW: 74160.1 Da PI: 6.7948

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020681999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.2	7.4e-13	176	233	6	63
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + r+++NRe+A+ sRqRKk+++eeLeekv ++ + +L ++++ e a+lk+++ XP_020681999.1 176 KKARLMRNRESAQLSRQRKKEYVEELEEKVRSMNSTIAELNSKISFVMAENASLKQQL 233 45699**************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MAELAAADSF SPPIDLCSDP NFLDPHLFPD DLFLPSGGLS SEIDLDFDID GIDWDISMDD 60 LLLPEDTNAL SLPSDTSNDR SPPQFGVLTS SPSPATSGSI INVSSPESGH SANCSTESGA 120 DFKQEDEKNG RVTKMMKKRE EECVKSNINP RSSKFRRSED FSSCVFNAAS KEDEMKKARL 180 MRNRESAQLS RQRKKEYVEE LEEKVRSMNS TIAELNSKIS FVMAENASLK QQLGVSGSSG 240 FSPGVCPPPS VVPMNFPWVP YPAFAFRQQV SPVPLVPIPK LKSQQAAASQ TAKKTEKKRE 300 SKIRKVASIT FLGFFFFALI VGGLIGRVDH RREESRNSGA APIKNGLLGS PNGMVLSVSG 360 RTRSLTGSEQ FGFNDGQSSK VGVDTSFQNG KVGPEDKSWP SNSLMITQNS SESLPALLYV 420 PRNGKHVEIN GNLIINSVLA TEKGVAEVKS RDQRKKPSGN EGIETSLVIA NLDSRMALST 480 RDISGRTKSY GSSAEHQRSL SSDSEDAVID TSQDGFLQQW FREGMAGPIF SSSTCTEVFQ 540 FQISPSSSSS SAVITSSMVN TTDTAIANSN ISNTSSSPRQ SVIKNRRVLY PQAIPLPGST 600 LNHTEHIGKR PEGSSFQRNA TGPPMVVSVL IDPKEASDGD VDGMKSHNKS LQRIFVVILL 660 DSVKYVTYSC VLPFNSRSPH LVN

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MAELAAADSF SPPIDLCSDP NFLDPHLFPD DLFLPSGGLS SEIDLDFDID GIDWDISMDD  60
LLLPEDTNAL SLPSDTSNDR SPPQFGVLTS SPSPATSGSI INVSSPESGH SANCSTESGA  120
DFKQEDEKNG RVTKMMKKRE EECVKSNINP RSSKFRRSED FSSCVFNAAS KEDEMKKARL  180
MRNRESAQLS RQRKKEYVEE LEEKVRSMNS TIAELNSKIS FVMAENASLK QQLGVSGSSG  240
FSPGVCPPPS VVPMNFPWVP YPAFAFRQQV SPVPLVPIPK LKSQQAAASQ TAKKTEKKRE  300
SKIRKVASIT FLGFFFFALI VGGLIGRVDH RREESRNSGA APIKNGLLGS PNGMVLSVSG  360
RTRSLTGSEQ FGFNDGQSSK VGVDTSFQNG KVGPEDKSWP SNSLMITQNS SESLPALLYV  420
PRNGKHVEIN GNLIINSVLA TEKGVAEVKS RDQRKKPSGN EGIETSLVIA NLDSRMALST  480
RDISGRTKSY GSSAEHQRSL SSDSEDAVID TSQDGFLQQW FREGMAGPIF SSSTCTEVFQ  540
FQISPSSSSS SAVITSSMVN TTDTAIANSN ISNTSSSPRQ SVIKNRRVLY PQAIPLPGST  600
LNHTEHIGKR PEGSSFQRNA TGPPMVVSVL IDPKEASDGD VDGMKSHNKS LQRIFVVILL  660
DSVKYVTYSC VLPFNSRSPH LVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	7e-79	bZIP family protein