PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682042.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 233aa    MW: 26407.9 Da    PI: 9.5948
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-11106149151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     +  +GV++  k+ +W A I++      +k+++lg+ g+ e+Aa+++++a+ 
  XP_020682042.1 106 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEDAARLYDRAAF 149
                     568***99..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MVSLRRRRLL GLCSGKSSIP VELPGSNESS GALNLSRNVN PFSIHPMPLI SISREKPTNI  60
HEISFGSSVV SATSSPKEEI DNYFPGKDMK HRKRYRRKLY EDQEPCVMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEDA ARLYDRAAFM CGRQPNFELP EEEKHELSHY NWEEFLAITR  180
NAINHKKLQR RIGGGRRRKS GIEMRGSDVE EPERGACGSP STSDDGEVEV FAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.23e-43ERF family protein