PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020682044.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 387aa MW: 42495 Da PI: 6.0768

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020682044.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	215	270	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++ LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_020682044.1 215 KARRCWSPELHRRFVNALHILGGSQVATPKQIRELMNVDGLTNDEVKSHLQKYRLH 270 68****************************************************97 PP
2	Myb_DNA-binding	43.7	6.1e-14	217	268	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a + lGg t+k I + m+ g+t ++ks++qky+ XP_020682044.1 217 RRCWSPELHRRFVNALHILGGSqvaTPKQIRELMNvDGLTNDEVKSHLQKYR 268 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MASSSSSELI SLDYKLISSY SINQNQNPIA DHMHKLQDFL ARLEEESLKI EAFKRELPLC 60 MQLLNNAMEA YRKQLETYQA SQEAQPVLEE FIPLKKTSVE ESEMANWMVS AQLWSSPAAD 120 EADSAKQGEE EHSLVTFSSK LVLDAKPRIR GAFQPFSKQK KKDISELALA RSIQKEMEEK 180 ESCSKSNEGE EKQGKREGSC SVSSDVAAPA ATQRKARRCW SPELHRRFVN ALHILGGSQV 240 ATPKQIRELM NVDGLTNDEV KSHLQKYRLH TRRPMQSPPP PPTTAMAPQL VVLGGIWVPP 300 GYATSAAAAA SAVAAGTTLY GANPSPAHYC PPPPLYHLSP LLSGGGGRAV SAFKNRRGSS 360 ESESIEEEVV EMISGVEAED GDVVEKF

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MASSSSSELI SLDYKLISSY SINQNQNPIA DHMHKLQDFL ARLEEESLKI EAFKRELPLC  60
MQLLNNAMEA YRKQLETYQA SQEAQPVLEE FIPLKKTSVE ESEMANWMVS AQLWSSPAAD  120
EADSAKQGEE EHSLVTFSSK LVLDAKPRIR GAFQPFSKQK KKDISELALA RSIQKEMEEK  180
ESCSKSNEGE EKQGKREGSC SVSSDVAAPA ATQRKARRCW SPELHRRFVN ALHILGGSQV  240
ATPKQIRELM NVDGLTNDEV KSHLQKYRLH TRRPMQSPPP PPTTAMAPQL VVLGGIWVPP  300
GYATSAAAAA SAVAAGTTLY GANPSPAHYC PPPPLYHLSP LLSGGGGRAV SAFKNRRGSS  360
ESESIEEEVV EMISGVEAED GDVVEKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-76	G2-like family protein