PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682171.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 253aa    MW: 28355.9 Da    PI: 6.8037
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-193079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r++lg+f taeeAa a++ a+++l+g
  XP_020682171.1 30 EYRGVRQRT-WGKWVAEIREPKK---RTRVWLGSFSTAEEAALAYDDAARRLYG 79
                    69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDNLIKRPPP RPWKKGPSRG KGGPLNSSCE YRGVRQRTWG KWVAEIREPK KRTRVWLGSF  60
STAEEAALAY DDAARRLYGP EAYLNLPHLR SLPCSSSSVS TSKPFSRHRF LRWVPVTGGG  120
AGRPLLNLSA QHSVHSIHQR LEEIKKSSSS STGSVSKVVQ YEERPQIDLK EFLEQMGVIK  180
QDDKVVEGRR EEEEEKAEES NGGELMNWDE LEEIRAFEEH AAAVVGGGGG VQLPVYLDVD  240
EELSGLPIPI WDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-25ERF family protein