PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020682200.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 295aa MW: 32774.3 Da PI: 5.3117

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020682200.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	3e-16	212	268	3	59
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k+l ++++ + XP_020682200.2 212 DAKRFRRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSTLMKRLTDVNQKYNEA 268 679********************************************9999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MDRDFSVEEM SGPFWPPSPV GINRSPSEWE FEKFLEEVAV QKTSSTSVPI DPSPDSYQRP 60 HPNRDPKSSP ICNESASSFG SSSVRKGEGR VARGEDEVVE IKGSRPSVAA QSLQSDPSAN 120 PDPEEYAAYL KQKLDMYCAA VAKSRGSGIM LQDSSLADNM PHLSDSLPVG SEALVKGFSQ 180 ARTGTSGSSR EQSDDDEFDG EAETAENMDP SDAKRFRRML SNRESARRSR RRKQAHLSEL 240 ETQVSQLRVE NSTLMKRLTD VNQKYNEAAV DNRILKADVE TLRAKVTHMR FMIVH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	234	RRSRRRKQ
2	229	234	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.3	8e-44	bZIP family protein