PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682526.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family BES1
Protein Properties Length: 307aa    MW: 33513.6 Da    PI: 9.4945
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.61.7e-6441542145
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl....eeaeaagssasaspes 92 
                     g+gr ptwkErEnnkrRERrRRaiaaki++GLR  Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg kp+    e+ +++  s+++sp+s
  XP_020682526.1   4 GGGRLPTWKERENNKRRERRRRAIAAKIFTGLRTLGNYKLPKHCDNNEVLKALCVEAGWIVEEDGTTYRKGNKPPlpplEAVATGAPSTNISPCS 98 
                     89************************************************************************9977666677777899****9 PP

          DUF822  93 slq.sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145
                     s   +s+ ss ++spv+sy+asp+sssfpsp++ +++ + s   ++llp+l++ls+
  XP_020682526.1  99 SPYhLSPPSSVFTSPVPSYHASPASSSFPSPTRHENTDNPSFnpSHLLPFLRNLSS 154
                     9777*****************************99987765466999***999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MTSGGGRLPT WKERENNKRR ERRRRAIAAK IFTGLRTLGN YKLPKHCDNN EVLKALCVEA  60
GWIVEEDGTT YRKGNKPPLP PLEAVATGAP STNISPCSSP YHLSPPSSVF TSPVPSYHAS  120
PASSSFPSPT RHENTDNPSF NPSHLLPFLR NLSSLPPLRI SNSAPVTPPL SSPTSSRPPK  180
LRKPNWDYTA CRNHPLVAAS APTSPTRSRR HLHPATIPEC DESDVSVVDS GRWVNFHNTA  240
PASPTFNLIN RAAPTPDSAV GAGGVTERGM GATEFEFENR WVKPWEGERI HEVGTVEDLE  300
LTLGLGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-64BES1 family protein