PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020682551.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 271aa MW: 27209.5 Da PI: 10.392

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020682551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.9	1.8e-38	37	123	3	88
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ + s +ss+s++ ++ XP_020682551.1 37 VKKAPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFTtASTSLRSSTSAPIEN 123 79******************************************************************8885444555555433333 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MPAAAEGGAS GGGTGQASTV AVNGGSGNGA ATGALVVKKA PSKDRHSKVD GRGRRIRMPI 60 ICAARVFQLT RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFTTAS TSLRSSTSAP 120 IENKSGASSV TAVSSFPGTH LLTQPLAPAP FILGKRIRSD DDSDGSAGKD NGCSGAGIAA 180 MAQTLGPAGG FWAVPARSDF GQVWSFAAPE MVMPQPAFSG RFAAAVQSVG EASAARVGNY 240 LPIAQGHLNL LASLSGSPAA GAAGRREDEP R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	5e-53	TCP family protein