PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682760.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 256aa    MW: 27682.5 Da    PI: 6.2369
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682760.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof110.58.2e-353691560
          zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                     l cprC+stntkfCyynnys sqPr+fC+ Crr+Wt+GG+lrn+PvGggr+++++
  XP_020682760.1 36 LLMCPRCESTNTKFCYYNNYSRSQPRHFCRVCRRHWTEGGTLRNIPVGGGRKNKRR 91
                    578**********************************************9877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MGLSSNQVSV DIHHWPQGGL EFLKSEGREE KQNAPLLMCP RCESTNTKFC YYNNYSRSQP  60
RHFCRVCRRH WTEGGTLRNI PVGGGRKNKR RKITPTATSL AAAAGGNPIA PVVGEMKDPI  120
FPDILRQVLL HQPPPPPPPL PLESPCMDTL EGLFGASLPK TFLTFMEDFS GVSSGLALSA  180
GEIPFMGAAS TSHQNLSGVQ DVSGGCGDGF LGMMDASAAS IWVKKETVFP ASYWDFWDGG  240
AEDLNIGAVA ETMLPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.11e-28Dof family protein