PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682843.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 174aa    MW: 18901.4 Da    PI: 5.3412
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000133961123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C  C++ Fs+   L  H++ H
  XP_020682843.1 39 YECVFCKRGFSTAQALGGHMNIH 61
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEGEEQEEHH NETEPPESAG DDAGTYAGAT AGAGAGRFYE CVFCKRGFST AQALGGHMNI  60
HRRDRTKLGS ARSSPPGPRR AEEAYHPYSR EQRRTLPQAV ESSSSNYAVY FPGSSSTSGS  120
GDKRELVLAG EELQLGLSEP GQETRKEKGK DDQVVSEYLD LELRLGHSKG HESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.14e-15C2H2 family protein