PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020682957.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 170aa    MW: 19093.6 Da    PI: 5.4749
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020682957.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2575e-182577156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s+y GVr+++ +g+++AeIrd +++g  kr++lg+f +aeeAa  +++a+ + +ge
  XP_020682957.2 25 SCYIGVRRRP-WGKFAAEIRDSTQRG--KRVWLGTFKSAEEAALVYDQAAFSTRGE 77
                    78********.**********65565..***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MAPTILFHAQ TQSPETNPPP RERSSCYIGV RRRPWGKFAA EIRDSTQRGK RVWLGTFKSA  60
EEAALVYDQA AFSTRGETAV LNFPVERVRE SLEGEELNGS QEKISLSPLL AIKKKNIVRG  120
RRLRGQSAEI GAKERGEEEE KVEGVLVLED LGTEYLEELL RLSVPEDSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-36ERF family protein