PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683026.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family FAR1
Protein Properties Length: 246aa    MW: 28564.7 Da    PI: 5.8155
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1674.9e-2161148290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     ++++YA++ GFsvrk++++   ++++i++++fvCsk g++++ + + +++r tr+  rtgC a+++   ++dg w+v+++ +  nH+l+
  XP_020683026.1  61 CFCTYAHDNGFSVRKDHHSFWPNSRKIKSKDFVCSKAGFKKSYDLN-SRKRFTRPDVRTGCPAMVRFVTDEDGYWHVKRFFESYNHKLS 148
                     799***************************************9999.99**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDCSAKREVE EGMEEGVHES ERMHESEGLV HESESEPNLA GNSSGFDISA IYKDETEAYE  60
CFCTYAHDNG FSVRKDHHSF WPNSRKIKSK DFVCSKAGFK KSYDLNSRKR FTRPDVRTGC  120
PAMVRFVTDE DGYWHVKRFF ESYNHKLSSP ADRHLLRSCR NVVEEKASVL KSMIDAGIRT  180
VDAYAYLAEK VGECENIGFS KRDAYNFTQK EKRARIEIDD TNSLIQLFKD RLVEDHMFTW  240
DVQYDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-14FAR1 family protein