PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683091.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 291aa    MW: 32324.8 Da    PI: 4.9755
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683091.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.53e-383387761
          zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    +cprCds+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ 
  XP_020683091.1 33 NCPRCDSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRG 87
                    8***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MFSPEDHRML SYATRSAPVD HRRWKPSLEI APNCPRCDSS NTKFCYYNNY SLTQPRYFCK  60
GCRRYWTKGG SLRNVPVGGG CRKNRRGKSA RLSSDSITSS TSSSSSLRID TTRVLDSGLR  120
PDQALDDMFD TYYPSSDSGG SNIDMAVMYA RYLNQVPDKL PVEIDDSFGF IGSVTAELSS  180
SSTPSTDMNC QTVSQADEGN LGFMASNCGM EESVVFPRLE YSSSMLPEMN GGDVFSMNWG  240
SVYPNMPWPA QEQNLAVAST RVQQEIGSNH HFQELVVGDW SSMDQSGFEA F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.18e-39Dof family protein