PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683179.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

STAT

Protein Properties

Length: 708aa MW: 78262.6 Da PI: 5.6407

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683179.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	162.3	1e-50	228	345	1	117
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 ldvvl++a+gq v+kd+e+ asL+yad+g++vek+ d++ apLL+ ++G+e++s++rp+ + G+a+fklk+sqLssk+dnrLf i+f+ + k XP_020683179.1 228 LDVVLSDAVGQFVHKDMEITASLVYADNGAPVEKTqDNSFAPLLVGFEGLEYPSTERPIAVYLGHATFKLKLSQLSSKSDNRLFSICFRASQTKC 322 8********************************67788*************************************************** PP STAT 95 ypfleavskpirCisrsrntrss 117 ypf+e+ s pirCisrsr r++ XP_020683179.1 323 YPFFETRSPPIRCISRSRCIRPV 345 ****************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MAAGECEQEY LMLKDVRIDL NRDGVFGEEG FAGFSLCLWI YLSSSAWPSS VILGQVSSEI 60 EGEVPFLALN EQNKLILFPL MFLHSEASFA GSTFPWSDIH HITSESECPL ERWVHVGCKA 120 TADYICLYLN GELSDNMPLS SSSDDHNLDN FKKVALAGSS GNDGKLQGYV YNASMLSLSA 180 SIKDDFAKNP PVKLSLNGSC TSDALEVGND GVWSIVGGKA SCRRNFSLDV VLSDAVGQFV 240 HKDMEITASL VYADNGAPVE KTQDNSFAPL LVGFEGLEYP STERPIAVYL GHATFKLKLS 300 QLSSKSDNRL FSICFRASQT KCYPFFETRS PPIRCISRSR CIRPVVIGKR QASASPICDR 360 TQLPGINDRF QETHEKIGIG HAEIVSHRKQ ANGLSSKRPK ISPDKSSKQV DANANIAQEE 420 KAFKMNSEAR SNNLDGSDNC PSDSESIDAR NSEVKCIGES IDPMSDMVIF RYCLEGTYER 480 SLLLKEIIKS SSNEELVTFA DQVCLYSGCL HHRYPILISK KLVQEGNDTW NSICQNGNRA 540 LWITATVELN KRFMSISRST THGLSEKDLE VLRGIAGCGE ELGLENFNAM WQWLYPVAVA 600 LSDVQINGMW ECTSPKWIEG FITVEEAEKS LKCPRGIQKP GTFVLRFPTS RSWPHPDAGS 660 LVVTYIGADL TIHHKLISID HSKESGAESL QNLLLKEPEL SQLGRVVR

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MAAGECEQEY LMLKDVRIDL NRDGVFGEEG FAGFSLCLWI YLSSSAWPSS VILGQVSSEI  60
EGEVPFLALN EQNKLILFPL MFLHSEASFA GSTFPWSDIH HITSESECPL ERWVHVGCKA  120
TADYICLYLN GELSDNMPLS SSSDDHNLDN FKKVALAGSS GNDGKLQGYV YNASMLSLSA  180
SIKDDFAKNP PVKLSLNGSC TSDALEVGND GVWSIVGGKA SCRRNFSLDV VLSDAVGQFV  240
HKDMEITASL VYADNGAPVE KTQDNSFAPL LVGFEGLEYP STERPIAVYL GHATFKLKLS  300
QLSSKSDNRL FSICFRASQT KCYPFFETRS PPIRCISRSR CIRPVVIGKR QASASPICDR  360
TQLPGINDRF QETHEKIGIG HAEIVSHRKQ ANGLSSKRPK ISPDKSSKQV DANANIAQEE  420
KAFKMNSEAR SNNLDGSDNC PSDSESIDAR NSEVKCIGES IDPMSDMVIF RYCLEGTYER  480
SLLLKEIIKS SSNEELVTFA DQVCLYSGCL HHRYPILISK KLVQEGNDTW NSICQNGNRA  540
LWITATVELN KRFMSISRST THGLSEKDLE VLRGIAGCGE ELGLENFNAM WQWLYPVAVA  600
LSDVQINGMW ECTSPKWIEG FITVEEAEKS LKCPRGIQKP GTFVLRFPTS RSWPHPDAGS  660
LVVTYIGADL TIHHKLISID HSKESGAESL QNLLLKEPEL SQLGRVVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17040.1	1e-150	STAT family protein