PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683180.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

STAT

Protein Properties

Length: 705aa MW: 77876.2 Da PI: 5.7486

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	162.3	1e-50	228	346	1	118
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkk 94 ldvvl++a+gq v+kd+e+ asL+yad+g++vek+ d++ apLL+ ++G+e++s++rp+ + G+a+fklk+sqLssk+dnrLf i+f+ + k XP_020683180.1 228 LDVVLSDAVGQFVHKDMEITASLVYADNGAPVEKTqDNSFAPLLVGFEGLEYPSTERPIAVYLGHATFKLKLSQLSSKSDNRLFSICFRASQTKC 322 8********************************67788*************************************************** PP STAT 95 ypfleavskpirCisrsrntrsss 118 ypf+e+ s pirCisrsr r++ XP_020683180.1 323 YPFFETRSPPIRCISRSRCIRPVV 346 ****************999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MAAGECEQEY LMLKDVRIDL NRDGVFGEEG FAGFSLCLWI YLSSSAWPSS VILGQVSSEI 60 EGEVPFLALN EQNKLILFPL MFLHSEASFA GSTFPWSDIH HITSESECPL ERWVHVGCKA 120 TADYICLYLN GELSDNMPLS SSSDDHNLDN FKKVALAGSS GNDGKLQGYV YNASMLSLSA 180 SIKDDFAKNP PVKLSLNGSC TSDALEVGND GVWSIVGGKA SCRRNFSLDV VLSDAVGQFV 240 HKDMEITASL VYADNGAPVE KTQDNSFAPL LVGFEGLEYP STERPIAVYL GHATFKLKLS 300 QLSSKSDNRL FSICFRASQT KCYPFFETRS PPIRCISRSR CIRPVVIGKR QASASPICDR 360 TQLPGINDRF QETHEKIGIG HAEIVSHRKQ ANGLSSKRPK ISPDKSSKQV DANANIAQAF 420 KMNSEARSNN LDGSDNCPSD SESIDARNSE VKCIGESIDP MSDMVIFRYC LEGTYERSLL 480 LKEIIKSSSN EELVTFADQV CLYSGCLHHR YPILISKKLV QEGNDTWNSI CQNGNRALWI 540 TATVELNKRF MSISRSTTHG LSEKDLEVLR GIAGCGEELG LENFNAMWQW LYPVAVALSD 600 VQINGMWECT SPKWIEGFIT VEEAEKSLKC PRGIQKPGTF VLRFPTSRSW PHPDAGSLVV 660 TYIGADLTIH HKLISIDHSK ESGAESLQNL LLKEPELSQL GRVVR

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MAAGECEQEY LMLKDVRIDL NRDGVFGEEG FAGFSLCLWI YLSSSAWPSS VILGQVSSEI  60
EGEVPFLALN EQNKLILFPL MFLHSEASFA GSTFPWSDIH HITSESECPL ERWVHVGCKA  120
TADYICLYLN GELSDNMPLS SSSDDHNLDN FKKVALAGSS GNDGKLQGYV YNASMLSLSA  180
SIKDDFAKNP PVKLSLNGSC TSDALEVGND GVWSIVGGKA SCRRNFSLDV VLSDAVGQFV  240
HKDMEITASL VYADNGAPVE KTQDNSFAPL LVGFEGLEYP STERPIAVYL GHATFKLKLS  300
QLSSKSDNRL FSICFRASQT KCYPFFETRS PPIRCISRSR CIRPVVIGKR QASASPICDR  360
TQLPGINDRF QETHEKIGIG HAEIVSHRKQ ANGLSSKRPK ISPDKSSKQV DANANIAQAF  420
KMNSEARSNN LDGSDNCPSD SESIDARNSE VKCIGESIDP MSDMVIFRYC LEGTYERSLL  480
LKEIIKSSSN EELVTFADQV CLYSGCLHHR YPILISKKLV QEGNDTWNSI CQNGNRALWI  540
TATVELNKRF MSISRSTTHG LSEKDLEVLR GIAGCGEELG LENFNAMWQW LYPVAVALSD  600
VQINGMWECT SPKWIEGFIT VEEAEKSLKC PRGIQKPGTF VLRFPTSRSW PHPDAGSLVV  660
TYIGADLTIH HKLISIDHSK ESGAESLQNL LLKEPELSQL GRVVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17040.1	1e-151	STAT family protein