PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683196.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 219aa MW: 25000.5 Da PI: 9.5206

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.5	5e-40	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 lppGfrFhPt+eelvv+yL++k+ + +l++ +i+e+d+ k++PwdLp + ++ ++++f+ +++k+++++ r + +++ gyWk+ gk+k+vl+ XP_020683196.1 14 LPPGFRFHPTEEELVVQYLRRKAFSFPLPA-AIIPEIDLGKLNPWDLP--CGSGGEKYFFYLRESKSEQKKGRVSYqKARLGYWKSMGKEKPVLA 105 79*************************9.88***********..445666777777777777776676665899**********9 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++elvglk+++vfy+g++p+g+ktdW+m++y+l XP_020683196.1 106 SshGNELVGLKQVMVFYRGKSPHGSKTDWIMNQYSL 141 8778889*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MERKEFMQHG LVRLPPGFRF HPTEEELVVQ YLRRKAFSFP LPAAIIPEID LGKLNPWDLP 60 CGSGGEKYFF YLRESKSEQK KGRVSYQKAR LGYWKSMGKE KPVLASSHGN ELVGLKQVMV 120 FYRGKSPHGS KTDWIMNQYS LSNNELLKSS TQSLIASSKE WVVCQIFVKR RSMKLRVRNS 180 RHEENLQIPA TSSSSSSSSC ITEDLSDEEE SVNGEEAMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	3e-58	NAC family protein