PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683310.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 174aa    MW: 19855.1 Da    PI: 8.8422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683310.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.61.9e-071058554
                    HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                     + +E+ RR +++    +L  l+P+     +++  s  + L +A  YI++L
  XP_020683310.1 10 RKTVEKLRRMQMKALCLKLANLIPQdY--LSKENTSQQDHLDRAAAYIHNL 58
                    5789*********************55..45555**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MKGGEGKMDR KTVEKLRRMQ MKALCLKLAN LIPQDYLSKE NTSQQDHLDR AAAYIHNLTQ  60
RIQKLKHRKE LGICNYMESD TEIEDSTKLE FKFPVVEVRH QDQNLEVLLI TGLKKKFALH  120
EVIGILEEGG ADVVNASFSI VGNKIIHTIH CQAISSRIGL EASRVSEMLQ QLMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-23bHLH family protein