PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683527.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 229aa    MW: 24589.9 Da    PI: 8.76
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.41.7e-082673355
             AP2  3 ykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    y GVr + +  +W +e    ++      k++++g++ t+e+Aa a++ a+++++g
  XP_020683527.1 26 YYGVRLRGR--KWTSE---AYNqH--EsKNIWIGTHFTPEMAAIAHDVAALAFNG 73
                    669998775..9**99...44322..25**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MANSNPPSQV QISASNTQPS VPPFHYYGVR LRGRKWTSEA YNQHESKNIW IGTHFTPEMA  60
AIAHDVAALA FNGASALLNF PDIIQSLPVP KSISIVDIRA AVEEATKQFS AMPEVVDASE  120
VPPQDIGKTY ITACPRDKSC QRPLPRLPVP VLHAQGCPRA PTLAASTCLH THALAHSSLI  180
ASAMSGRVNP ATCWVGSGFG FSTHLSTRVG LGSARFNPGQ MRIRSESDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.13e-19ERF family protein