PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683529.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 164aa    MW: 18123.6 Da    PI: 4.6157
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.51.6e-082473155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    s+++G+  +   g+W+A+++ +     +  k+++ g++ t+e+Aa a++ a ++++g
  XP_020683529.1 24 SHFRGIVLR--GGKWAARVYRF-----HdsKSIWFGTYFTPEMAAIAHDVAELAING 73
                    567888654..6******7775.....345********************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MADSTLSFQV QIASSNAQPR VPPSHFRGIV LRGGKWAARV YRFHDSKSIW FGTYFTPEMA  60
AIAHDVAELA INGDRAWLNF PDVIQSLPVP KSTSIVDIRA AIAAAAASAK QFIARPEVVD  120
AYEVPSQEIT EYVDEDELFN MPQLLIEMAE GLMVSPPRFG PPYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-24ERF family protein