PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683531.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 178aa    MW: 19751.3 Da    PI: 4.0748
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.92.2e-122871553
             AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                    G++  ++rg+W + I+ ++e   +k+++lg++ t+e+Aa a++ a++++
  XP_020683531.1 28 GIS--SRRGKWTSKIYSWRE---SKTIWLGTYSTPEMAAIAYDVAALAF 71
                    664..679*********965...5**********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MANSNPLSKV EIPASNTPPI IPPSYYLGIS SRRGKWTSKI YSWRESKTIW LGTYSTPEMA  60
AIAYDVAALA FNEGNAVFNF PYAIRSHPMP KSTSIADIQA AAAAAAEQFG ARFDDVDASE  120
VPLKEICEYV DEEELFNMPQ VLIEMAEGLM VSPPRLGLLE SDEPLEILKD DNLWNFDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.16e-26ERF family protein