PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020683532.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 122aa    MW: 13445.6 Da    PI: 9.6922
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020683532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.93.4e-102673355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+G+  +k  g+W++e++ +++   +k ++lg +  +e+Aa a++ a+++++g
  XP_020683532.1 26 YHGIL-RK-IGKWRSEVYSWRD---SKLIYLGIYSKPEMAAIAYDVAALAFNG 73
                    77773.56.8******888844...5**********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MADSNLPSQV EIPTFKPLPF IAHLRYHGIL RKIGKWRSEV YSWRDSKLIY LGIYSKPEMA  60
AIAYDVAALA FNGDKAVLNF PDAIWSHPVP KSNSIVDIKA AAALAAKQFG SRLEGVDASK  120
VC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-17ERF family protein