PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683722.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 358aa MW: 37326.8 Da PI: 8.3796

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683722.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7.1e-39	66	124	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk k XP_020683722.1 66 PQQKLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKAKP 124 68999***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MIQELLSAVV EERKFSFPGG GRLVSDDAPS PFLYSTSTAT TLSPSSSSST IQPSSSPSPS 60 TASEPPQQKL RCPRCDSSNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR 120 KAKPVPIVAG SGKSGGGSKP NKQIPSLDAI ARAGFGFEPE LFQPSPILWT GPTAPTPPPH 180 TSHLLALLRA GGGAAIRSFE PSPLSSLSSI RIKEEGMMAE PTGVGLGLNG LNLDPLGQFS 240 SAAGMGSLWR NEGQMPYLQL QENGSPFGDA AAAAGIQELY QKLRPQAYCN DQLSIAMSNG 300 WSAPGCSSLA TSATLTSSIG GGGGSSNSAV AGAEPAMGGE FGYWNPAFSS WSDMSSTN

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MIQELLSAVV EERKFSFPGG GRLVSDDAPS PFLYSTSTAT TLSPSSSSST IQPSSSPSPS  60
TASEPPQQKL RCPRCDSSNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR  120
KAKPVPIVAG SGKSGGGSKP NKQIPSLDAI ARAGFGFEPE LFQPSPILWT GPTAPTPPPH  180
TSHLLALLRA GGGAAIRSFE PSPLSSLSSI RIKEEGMMAE PTGVGLGLNG LNLDPLGQFS  240
SAAGMGSLWR NEGQMPYLQL QENGSPFGDA AAAAGIQELY QKLRPQAYCN DQLSIAMSNG  300
WSAPGCSSLA TSATLTSSIG GGGGSSNSAV AGAEPAMGGE FGYWNPAFSS WSDMSSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	3e-32	Dof family protein