PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020683857.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

FAR1

Protein Properties

Length: 220aa MW: 25088.3 Da PI: 8.0096

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020683857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.3	4.4e-22	48	137	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++++YA++ GFsvrk++++ ++++i++++fvCsk ++++++++ +++r tr++ r+gC a+++ ++dg w+v+++ + HnHela XP_020683857.1 48 CFCTYAHDNGFSVRKNHHNFCPNSRNIKSKDFVCSKASFKKSDDHNsGKRKRLTRPVVRIGCPAMVRSVIDEDGYWHVKRFIESHNHELA 137 799***********************************9999984556666************999**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MDCSAKREVE EGMEEGVHES ESEPNLAGIS SGFNISAVYK DETEAYECFC TYAHDNGFSV 60 RKNHHNFCPN SRNIKSKDFV CSKASFKKSD DHNSGKRKRL TRPVVRIGCP AMVRSVIDED 120 GYWHVKRFIE SHNHELASPA DRRLLRLCRN VIEEKASVLK SMIDAGIRTV DAYAYLAEVV 180 GRCENVGFSK RDAYNFIQKE KRARIEIGDT NSLIQLFKDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-14	FAR1 family protein