PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020684338.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 619aa MW: 68611.9 Da PI: 4.6131

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020684338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.6	4.4e-48	12	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yLk+k++g+ vi+evd++k+ePwdLp k +k+++ ew+fF+++d ky++gkr +rat++g+Wkatgkd+++ XP_020684338.1 12 LPLGFRFRPTDEELLSHYLKRKINGRIKADRAVIPEVDVCKYEPWDLPeKsIIKSRDPEWFFFAPKDLKYRNGKRFKRATEAGFWKATGKDRPIR 106 699********************99777788**********95346677888********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++g+kktLvfy grapkge+t W++heyr XP_020684338.1 107 TRaPPMAIGMKKTLVFYLGRAPKGERTGWIIHEYRT 142 9855677*************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MATLEVIPLE SLPLGFRFRP TDEELLSHYL KRKINGRIKA DRAVIPEVDV CKYEPWDLPE 60 KSIIKSRDPE WFFFAPKDLK YRNGKRFKRA TEAGFWKATG KDRPIRTRAP PMAIGMKKTL 120 VFYLGRAPKG ERTGWIIHEY RTVEPEFDKG CFVLCKLYKK PEEKIGTSNA DKIDGSILSP 180 DIIWSSPDTT AQGDDALYET TPLHQEIVPL NWPETVDESM TKSEETYSYS DITADIGASG 240 IYMDNLKDDP DPSNLSSLNL GFEQNDSDIF YYNSPSDMSY LHFDDNGVGA FLKDDDDEVA 300 KLLDSILVSD EECLPELDQF LGNTSEAVPS TQVDPFKQET FLDKTSGIGI IIGNNADVEV 360 LLPQDAPGLA ASYQMSGSIS PSSHFMPLTP FSYNLLGPQL DSFIKNSTAN ELQSMASFNG 420 NAMFEGLEAS ETLFSVADIS QDLFKNEPNP SGEDNSTGIG IKLRPPRKRT SANPNHLGSQ 480 GMAAHGNAFR RIRLQTSLRV GSAVLTNQNS SSSNGDHDDK AEISESGNNA EFEIPKMAYC 540 GPSDNDDNEK KHTSSNHSQT PDPVLRLRTK EPNDLCAKPE GALMEAPKAA TINFGRVTVV 600 VPVILCVLCI GMGWFFSYR

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MATLEVIPLE SLPLGFRFRP TDEELLSHYL KRKINGRIKA DRAVIPEVDV CKYEPWDLPE  60
KSIIKSRDPE WFFFAPKDLK YRNGKRFKRA TEAGFWKATG KDRPIRTRAP PMAIGMKKTL  120
VFYLGRAPKG ERTGWIIHEY RTVEPEFDKG CFVLCKLYKK PEEKIGTSNA DKIDGSILSP  180
DIIWSSPDTT AQGDDALYET TPLHQEIVPL NWPETVDESM TKSEETYSYS DITADIGASG  240
IYMDNLKDDP DPSNLSSLNL GFEQNDSDIF YYNSPSDMSY LHFDDNGVGA FLKDDDDEVA  300
KLLDSILVSD EECLPELDQF LGNTSEAVPS TQVDPFKQET FLDKTSGIGI IIGNNADVEV  360
LLPQDAPGLA ASYQMSGSIS PSSHFMPLTP FSYNLLGPQL DSFIKNSTAN ELQSMASFNG  420
NAMFEGLEAS ETLFSVADIS QDLFKNEPNP SGEDNSTGIG IKLRPPRKRT SANPNHLGSQ  480
GMAAHGNAFR RIRLQTSLRV GSAVLTNQNS SSSNGDHDDK AEISESGNNA EFEIPKMAYC  540
GPSDNDDNEK KHTSSNHSQT PDPVLRLRTK EPNDLCAKPE GALMEAPKAA TINFGRVTVV  600
VPVILCVLCI GMGWFFSYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	9e-67	NAC family protein