PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684368.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 155aa    MW: 16800.8 Da    PI: 4.5642
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-17858156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    s+y+G+  +++ g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++l+g+
  XP_020684368.1  8 SRYRGI--RPRGGKWVSEIREPRK---TNRIWLGTYPTPEMAAAAYDVAALALRGA 58
                    79****..699**********854...49************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MADRSTSSRY RGIRPRGGKW VSEIREPRKT NRIWLGTYPT PEMAAAAYDV AALALRGADA  60
VLNFPDRAHT NIAPASTNPS DIRAAAAAAA ARMAAETSQP SMNEGGFVDE EEIFDMPQLL  120
VNMAEGMLLS PPRLSPLGSD ESPEVSEGEN LWHFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-32ERF family protein