PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684393.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 210aa    MW: 23031.6 Da    PI: 6.9775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-1853103155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr ++ +g+Wv+eIr p++   + r++lg+f t+e+Aa+a++ a+++++g
  XP_020684393.1  53 PVYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 103
                     68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MRDQGSSSEQ ESSPSSSSSS NRAPKANQSP DSDQVGRAAA DTVKRSRDRS KHPVYRGVRM  60
RSWGKWVSEI RQPRKKSRIW LGTFPTPEMA ARAHDVAALS IKGSAAILNF PELAASLPRP  120
ATLSPQDVQA AAAKAAIMEP SPPAILSPAS LLSPDELGEI VELPRLGTDF VFQETVHSWP  180
FSWSESTEDS TLFSDSLWPP NNFESHSWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.16e-56ERF family protein