PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684454.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 180aa    MW: 19841.4 Da    PI: 9.695
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.47.2e-1063103954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri ++f  L++l+P        K++ +++Le+A++Y+k L
  XP_020684454.1  63 ARERRHRISDRFRILKSLVPGG-----SKMDTVSMLEEAIHYVKFL 103
                     699*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MESFFNYYNQ QAPSSSSSSP PPLQNHHLLH KERKKAIAVP APKRGGGSGG GTKLSTDPQS  60
VAARERRHRI SDRFRILKSL VPGGSKMDTV SMLEEAIHYV KFLKAQIWLH QATMMLHGHE  120
ESSPLALTSN SNAMTASPSF PQVILNDSMV DSVMPAVPNF VNGSFQGEQQ MATDHYGFNY