PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020684836.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GATA
Protein Properties Length: 151aa    MW: 17389 Da    PI: 10.2402
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020684836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-192761135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    Cs C+t +TplWR+gpdg+k+LCnaCG++y k+++
  XP_020684836.1 27 CSDCQTPNTPLWRSGPDGPKSLCNACGIRYSKRRR 61
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MTRKRTKVDE QCKEKTATSM DEPVKFCSDC QTPNTPLWRS GPDGPKSLCN ACGIRYSKRR  60
RVEFKRAEEN KPTAMSCKNE GKVAVEVEEL KRRQREKQEK MLKVLLFRRR NLNVRWRKWP  120
PADFGGSGDG EEVAEAARLL LSLSSEMSIH S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15862KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.11e-16GATA family protein