PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020685032.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 183aa    MW: 20147 Da    PI: 8.5858
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020685032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB129.51.1e-4025122197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlG.fedyveplkvylkkyrele 94 
                     vre dr+lPia +srimkk+l  ++ki+kdaket+qecv efisf+t+ea dkc rekrk i+ dd+l a++tl  fedy++p ++y +ky+e+e
  XP_020685032.1  25 VRELDRLLPIAFISRIMKKALRPKGKIAKDAKETMQECVFEFISFITCEARDKCLREKRKKITEDDVLCAMTTLDrFEDYIKPHRLYSQKYKEIE 119
                     5899**********************************************************************66******************* PP

           NF-YB  95 gek 97 
                     g+ 
  XP_020685032.1 120 GDG 122
                     996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MAAEVPASPC GGSHESGDQS PRSNVRELDR LLPIAFISRI MKKALRPKGK IAKDAKETMQ  60
ECVFEFISFI TCEARDKCLR EKRKKITEDD VLCAMTTLDR FEDYIKPHRL YSQKYKEIEG  120
DGKGSAKGAE SSGKRDAGGL QGGNLSGSSM QGDMKMLQQG SFTEGMNYMN TQVGQMTKAS  180
NCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.12e-45NF-YB family protein