PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020685229.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 174aa    MW: 18520.7 Da    PI: 7.4412
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020685229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2491.5e-152370354
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                     kGVr ++ +g+Wv+eIr p     +   r++lg++ ++e Aa+a++aa ++l+
  XP_020685229.1 23 LKGVRMRR-WGSWVSEIRNP-----HqkSRIWLGSYSSPEAAARAYDAAHLCLK 70
                    59***998.**********7.....335*********************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MKTQSPSTSG GGDGAGTASK KPLKGVRMRR WGSWVSEIRN PHQKSRIWLG SYSSPEAAAR  60
AYDAAHLCLK SSSASLLSPK SIQRIAATAA ADTASSPPPA ELIKSTPLSD NNSSSVVASS  120
AEDSCVDFGE FQLSPPKWFV EDHMMNPSGF STTCLQAEEL NEIAGDITLW SFLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36900.17e-21ERF family protein