PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020685308.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 168aa MW: 19474.2 Da PI: 10.5153

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020685308.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.1	7.6e-49	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+ee++++yL++ ++gkkl++ ++i++v++y ++PwdLp+++k +e+ewyfF++rd+++ +g r+nr+t++g+Wkatg+d+++ s+ XP_020685308.2 11 PGFRFHPTEEEILDFYLRRAAAGKKLNV-DIITTVNLYLYDPWDLPAMAKMGEREWYFFVPRDRRQGNGGRPNRTTERGFWKATGSDRHIRSSvd 104 9*************************.99***********9889999**********************************9887 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++l+glkktLv+y+grap+g+ktdW+m+eyrl XP_020685308.2 105 PRRLIGLKKTLVYYRGRAPRGTKTDWIMNEYRL 137 7889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MERKGSEIEL PGFRFHPTEE EILDFYLRRA AAGKKLNVDI ITTVNLYLYD PWDLPAMAKM 60 GEREWYFFVP RDRRQGNGGR PNRTTERGFW KATGSDRHIR SSVDPRRLIG LKKTLVYYRG 120 RAPRGTKTDW IMNEYRLPDA SNSFGSAPTP KVCISFSLRL KKNDAVSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-72	NAC family protein